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Plant Pathogen Resistance Biotechnology
David B. Collinge (Edited by), DB Collinge (Author)
9781118867761, Wiley
Hardback, published 3 June 2016
448 pages
25.2 x 17.8 x 2.5 cm, 0.989 kg
Plant pathogens and diseases are among the most significant challenges to survival that plants face. Disease outbreaks caused by microbial or viral pathogens can decimate crop yields and have severe effects on global food supply. Understanding the molecular mechanisms underlying plant immune response and applying this understanding to develop biotechnological tools to enhance plant defense against pathogens has great potential for moderating the impact of plant disease outbreaks. Plant Pathogen Resistance Biotechnology’s main focus is an in depth survey of the biological strategies being used to create transgenic disease resistant plants for sustainable plant resistance Plant Pathogen Resistance Biotechnology is divided into four sections. The first section covers biological mechanisms underpinning disease resistance in plants, while the second highlights case studies of important pathogen-crop groups and then considers why the application of important pathogen-crop groups, transgenic-based strategies designed to selectively target pathogens could benefit crop production. The third section provides information on the status of transgenic crops around the world, and finally the last part explores high-tech alternatives to genetic engineering for developing disease resistant traits in plants.
List of Contributors xiii Foreword xix Acknowledgments xxv Chapter 1 The Status and Prospects for Biotechnological Approaches for Attaining Sustainable Disease Resistance 1 1.1 Introduction 1 1.2 Factors to consider when generating disease‐resistant crops 2 1.3 Opportunities to engineer novel cultivars for disease resistance 10 1.4 Technical barriers to engineering novel cultivars for disease resistance 13 1.5 Approaches for identification and selection of genes important for disease resistance 14 1.6 Promising strategies for engineering disease‐resistant crops 15 1.7 Future directions and issues 15 References 16 Part I: Biological Strategies Leading Towards Disease Resistance 21 Chapter 2 Engineering Barriers to Infection by Undermining Pathogen Effector Function or by Gaining Effector Recognition 23 2.1 Introduction 23 2.2 Plant defence and effector function 24 2.3 Strategies for engineering resistance 33 2.4 Perspective 42 References 43 Chapter 3 Application of Antimicrobial Proteins and Peptides in Developing Disease‐Resistant Plants 51 3.1 Introduction 51 3.2 Biological role of PR‐proteins 52 3.3 Antimicrobial peptides 56 3.4 Regulation of PR‐protein expression 57 3.5 Biotechnological application of PR‐protein genes in developing improved crop plants 60 3.6 Future directions 61 Acknowledgement 63 References 63 Chapter 4 Metabolic Engineering of Chemical Defence Pathways in Plant Disease Control 71 4.1 Introduction 71 4.2 Present status of metabolic engineering in the control of plant disease 73 4.3 Metabolic engineering: technical challenges and opportunities 78 4.4 The outlook for metabolically engineering of disease resistance in crops 83 References 85 Chapter 5 Arabinan: Biosynthesis and a Role in Host‐Pathogen Interactions 91 5.1 Introduction 91 5.2 Biosynthesis and modification of arabinan 94 5.3 Distribution of arabinan in different tissues and during development 96 5.4 Role of arabinan in plant growth and development 98 5.5 Roles of arabinan degrading enzymes in virulence of phytopathogenic fungi 99 5.6 Roles of arabinan in pathogen interactions 101 5.7 Conclusion 103 References 103 Chapter 6 Transcription Factors that Regulate Defence Responses and Their Use in Increasing Disease Resistance 109 6.1 Introduction 109 6.2 Transcription factors and plant defence 110 6.3 AP2/ERF transcription factors 111 6.4 bZIP transcription factors 113 6.5 WRKY transcription factors 114 6.6 MYB transcription factors 116 6.7 Other transcription factor families 117 6.8 Can the manipulation of specific transcription factors deliver sustainable disease resistance? 118 6.9 Have we chosen the right transgenes? 119 6.10 Have we chosen the right expression strategies? 120 6.11 What new ideas are there for the future of TF‐based crop improvement? 121 References 124 Chapter 7 Regulation of Abiotic and Biotic Stress Responses by Plant Hormones 131 7.1 Introduction 131 7.2 Regulation of biotic stress responses by plant hormones 132 7.3 Regulation of abiotic stress responses by plant hormones 140 7.4 Conclusions and further perspectives 145 References 147 Part II: Case Studies for Groups of Pathogens and Important Crops. Why is it Especially Advantageous to use Transgenic Strategies for these Pathogens or Crops? 155 Chapter 8 Engineered Resistance to Viruses: A Case of Plant Innate Immunity 157 8.1 Introduction 157 8.2 Mitigation of viruses 158 8.3 Biotechnology and virus resistance 158 8.4 Success stories 162 8.5 Challenges of engineering RNAi‐mediated resistance 163 8.6 Benefits of virus‐resistant transgenic crops 164 8.7 Conclusions 166 References 167 Chapter 9 Problematic Crops: 1. Potatoes: Towards Sustainable Potato Late Blight Resistance by Cisgenic R Gene Pyramiding 171 9.1 Potato late blight resistance breeding advocates GM strategies 171 9.2 GM strategies for late blight resistance breeding 177 9.3 Late blight‐resistant GM varieties 186 References 187 Chapter 10 Problematic Crops: 1. Grape: To Long Life and Good Health: Untangling the Complexity of Grape Diseases to Develop Pathogen‐Resistant Varieties 193 10.1 Introduction 193 10.2 Introduction to grapevine pathology 194 10.3 Approaches for the improvement of grapevine disease resistance 198 10.4 Pierce’s disease of grapevines: a case study 202 References 211 Chapter 11 Developing Sustainable Disease Resistance in Coffee: Breeding vs. Transgenic Approaches 217 11.1 Introduction 217 11.2 Agronomic aspects of coffee 217 11.3 Major threats to coffee plantations 219 11.4 Breeding for disease resistance and pest management 225 11.5 Various traits targeted for transgenic coffee development 227 11.6 Bottlenecks in coffee transgenic development 229 11.7 GM or hybrid joe: what choices to make? 235 Acknowledgements 236 Endnote 236 References 236 Webliographies 243 Chapter 12 Biotechnological Approaches for Crop Protection: Transgenes for Disease Resistance in Rice 245 12.1 Introduction 245 12.2 Plant immunity 247 12.3 Transgenic approaches to engineer disease resistance in rice plants 250 12.4 Targeted genome engineering 260 12.5 Safety issues of genetically engineered rice 261 12.6 Conclusions and future prospects 263 Acknowledgement 265 References 265 Part III: Status of Transgenic Crops Around the World 273 Chapter 13 Status of Transgenic Crops in Argentina 275 13.1 Transgenic crops approved for commercialization in Argentina 275 13.2 Economic impact derived from transgenic crops cultivation 278 13.3 Local developments 278 13.4 Perspectives 282 References 282 Chapter 14 The Status of Transgenic Crops in Australia 285 14.1 Introduction 285 14.2 Government policies 286 14.3 Field trials 287 14.4 Crops deregulated 287 14.5 Crops grown 287 14.6 Public sentiment toward GM crops 291 14.7 Value capture 291 14.8 What is in the pipeline 292 14.9 Summary 292 Endnotes 293 References 293 Chapter 15 Transgenic Crops in Spain 295 15.1 Introduction 295 15.2 Transgenic crops in Europe 296 15.3 Transgenic crops in Spain 297 15.4 Future prospects 300 Acknowledgements 302 References 302 Chapter 16 Biotechnology and Crop Disease Resistance in South Africa 305 16.1 Genetically modified crops in South Africa 305 16.2 Economic, social and health benefits of GM crops in South Africa 308 16.3 Biotechnology initiatives for crop disease control in South Africa 309 16.4 Future prospects 312 Acknowledgements 313 References 313 Part IV: Implications of Transgenic Technologies for Improved Disease Control 317 Chapter 17 Exploiting Plant Induced Resistance as a Route to Sustainable Crop Protection 319 17.1 Introduction 319 17.2 Examples of elicitors of induced resistance 321 17.3 Priming of induced resistance 326 17.4 Drivers and barriers to the adoption of plant activators in agriculture and horticulture 330 17.5 Conclusions and future prospects 334 References 334 Chapter 18 Biological Control Using Microorganisms as an Alternative to Disease Resistance 341 18.1 Introduction 341 18.2 Getting the right biocontrol organism 343 18.3 New approaches for studying the biology of BCAs and biocontrol interactions 351 18.4 Strategy for using biocontrol in IPM 354 References 357 Webliography 363 Chapter 19 TILLING in Plant Disease Control: Applications and Perspectives 365 19.1 Concepts of forward and reverse genetics 365 19.2 The TILLING procedure 366 19.3 Mutagenesis 366 19.4 DNA preparation and pooling of individuals 371 19.5 Mutation discovery 372 19.6 Identification and evaluation of the individual mutant 374 19.7 Bioinformatics tools 374 19.8 EcoTILLING 375 19.9 Modified TILLING approaches 375 19.10 Application of TILLING and TILLING‐related procedures in disease resistance 376 19.11 Perspectives 380 References 381 Chapter 20 Fitness Costs of Pathogen Recognition in Plants and Their Implications for Crop Improvement 385 20.1 The goal of durable resistance 385 20.2 New ways of using R‐genes 386 20.3 Costs of resistance in crop improvement 387 20.4 Fitness costs of R‐gene defences 388 20.5 Phenotypes of R‐gene over‐expression 390 20.6 Requirements for R‐protein function 391 20.7 Necrotic phenotypes of R‐gene mutants 394 20.8 Summary of fitness costs of R‐gene mutations 396 20.9 R‐genes in plant breeding 397 20.10 Biotech innovation and genetic diversity 400 20.11 Conclusion 400 Acknowledgement 400 References 400 Index 405
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Subject Areas: Science: general issues [PD]
