{"product_id":"analysis-of-biological-networks-hardback-9780470041444","title":"Analysis of Biological Networks (Hardback) 9780470041444","description":"\u003cfont face=\"Georgia\"\u003e\r\n\u003cp\u003e\u003cfont size=\"6\"\u003eAnalysis of Biological Networks\u003c\/font\u003e\u003cbr\u003e\r\n\r\n\r\n\r\n\r\n\r\n\u003c\/p\u003e\n\u003cp\u003e\u003cfont size=\"4\"\u003eBjörn H. Junker (Edited by), BH Junker (Author), Falk Schreiber (Edited by), Yi Pan (Series edited by), Albert Y. Zomaya (Series edited by)\u003c\/font\u003e\u003c\/p\u003e\r\n\r\n\u003cp\u003e\u003cfont size=\"3\"\u003e9780470041444, Wiley\u003c\/font\u003e\u003c\/p\u003e\r\n\r\n\u003cp\u003e\u003cfont size=\"3\"\u003eHardback, published 14 April 2008\u003c\/font\u003e\u003c\/p\u003e\r\n\r\n\u003cp\u003e\u003cfont size=\"3\"\u003e368 pages\u003cbr\u003e24 x 16.4 x 1.4 cm, 0.662 kg\u003c\/font\u003e\u003c\/p\u003e\r\n\r\n\r\n\r\n\u003cp align=\"justify\"\u003e\u003cem\u003e\u003cfont size=\"3\"\u003e\"This book is a wonderful text for biological network analysis. It comprehensively presents a numbers of analysis tools and their applications for understanding real biological problems. This book is a must-read for entry-level students and researchers, and a complete reference source for experts.\" (\u003ci\u003eComputing Reviews\u003c\/i\u003e, March 6, 2009)  \u003cp\u003e\"This book is an excellent introduction to the analysis of biological networks.  The exercise provided after each chapter make the book suitable for self-study, and the extensive references provide the interested reader with good sources for further reading.\" (\u003ci\u003eComputing Reviews\u003c\/i\u003e, August 21, 2008)\u003c\/p\u003e\u003c\/font\u003e\u003c\/em\u003e\u003c\/p\u003e\r\n\r\n\u003cp align=\"justify\"\u003e\u003cstrong\u003e\u003cfont size=\"3\"\u003e\u003cb\u003eAn introduction to biological networks and methods for their analysis\u003c\/b\u003e  \u003cp\u003e\u003ci\u003eAnalysis of Biological Networks\u003c\/i\u003e is the first book of its kind to provide readers with a comprehensive introduction to the structural analysis of biological networks at the interface of biology and computer science. The book begins with a brief overview of biological networks and graph theory\/graph algorithms and goes on to explore: global network properties, network centralities, network motifs, network clustering, Petri nets, signal transduction and gene regulation networks, protein interaction networks, metabolic networks, phylogenetic networks, ecological networks, and correlation networks.\u003c\/p\u003e \u003cp\u003e\u003ci\u003eAnalysis of Biological Networks\u003c\/i\u003e is a self-contained introduction to this important research topic, assumes no expert knowledge in computer science or biology, and is accessible to professionals and students alike. Each chapter concludes with a summary of main points and with exercises for readers to test their understanding of the material presented. Additionally, an FTP site with links to author-provided data for the book is available for deeper study.\u003c\/p\u003e \u003cp\u003eThis book is suitable as a resource for researchers in computer science, biology, bioinformatics, advanced biochemistry, and the life sciences, and also serves as an ideal reference text for graduate-level courses in bioinformatics and biological research.\u003c\/p\u003e\u003c\/font\u003e\u003c\/strong\u003e\u003c\/p\u003e\r\n\r\n\u003cp\u003e\u003cfont size=\"3\"\u003eForeword xiii  \u003cp\u003ePreface xv\u003c\/p\u003e \u003cp\u003eContributors xix\u003c\/p\u003e \u003cp\u003e\u003cb\u003ePART I INTRODUCTION 1\u003c\/b\u003e\u003c\/p\u003e \u003cp\u003e\u003cb\u003e1 Networks in Biology 3\u003c\/b\u003e\u003cbr\u003e \u003ci\u003eBjorn H. Junker\u003c\/i\u003e\u003c\/p\u003e \u003cp\u003e1.1 Introduction 3\u003c\/p\u003e \u003cp\u003e1.2 Biology 101 4\u003c\/p\u003e \u003cp\u003e1.3 Systems Biology 8\u003c\/p\u003e \u003cp\u003e1.4 Properties of Biological Networks 8\u003c\/p\u003e \u003cp\u003e1.5 Summary 12\u003c\/p\u003e \u003cp\u003e1.6 Exercises 12\u003c\/p\u003e \u003cp\u003e\u003cb\u003e2 Graph Theory 15\u003c\/b\u003e\u003cbr\u003e \u003ci\u003eFalk Schreiber\u003c\/i\u003e\u003c\/p\u003e \u003cp\u003e2.1 Introduction 15\u003c\/p\u003e \u003cp\u003e2.2 Basic Notation 16\u003c\/p\u003e \u003cp\u003e2.3 Special Graphs 19\u003c\/p\u003e \u003cp\u003e2.4 Graph Representation 23\u003c\/p\u003e \u003cp\u003e2.5 Graph Algorithms 24\u003c\/p\u003e \u003cp\u003e2.6 Summary 27\u003c\/p\u003e \u003cp\u003e2.7 Exercises 27\u003c\/p\u003e \u003cp\u003e\u003cb\u003ePART II NETWORK ANALYSIS 29\u003c\/b\u003e\u003c\/p\u003e \u003cp\u003e\u003cb\u003e3 Global Network Properties 31\u003c\/b\u003e\u003cbr\u003e \u003ci\u003eRalf Steuer and Gorka Zamora Lopez\u003c\/i\u003e\u003c\/p\u003e \u003cp\u003e3.1 Introduction 31\u003c\/p\u003e \u003cp\u003e3.2 Global Properties of Complex Networks 33\u003c\/p\u003e \u003cp\u003e3.3 Models of Complex Networks 43\u003c\/p\u003e \u003cp\u003e3.4 Additional Properties of Complex Networks 48\u003c\/p\u003e \u003cp\u003e3.5 Statistical Testing of Network Properties 52\u003c\/p\u003e \u003cp\u003e3.6 Summary 57\u003c\/p\u003e \u003cp\u003e3.7 Exercises 58\u003c\/p\u003e \u003cp\u003e\u003cb\u003e4 Network Centralities 65\u003c\/b\u003e\u003cbr\u003e \u003ci\u003eDirk Koschutzki\u003c\/i\u003e\u003c\/p\u003e \u003cp\u003e4.1 Introduction 65\u003c\/p\u003e \u003cp\u003e4.2 Centrality Definition and Fundamental Properties 67\u003c\/p\u003e \u003cp\u003e4.3 Degree and Shortest Path-Based Centralities 69\u003c\/p\u003e \u003cp\u003e4.4 Feedback-Based Centralities 77\u003c\/p\u003e \u003cp\u003e4.5 Tools 80\u003c\/p\u003e \u003cp\u003e4.6 Summary 80\u003c\/p\u003e \u003cp\u003e4.7 Exercises 81\u003c\/p\u003e \u003cp\u003e\u003cb\u003e5 Network Motifs 85\u003c\/b\u003e\u003cbr\u003e \u003ci\u003eHenning Schwobbermeyer\u003c\/i\u003e\u003c\/p\u003e \u003cp\u003e5.1 Introduction 85\u003c\/p\u003e \u003cp\u003e5.2 Definitions and Basic Concepts 86\u003c\/p\u003e \u003cp\u003e5.3 Motif Statistics and Motif-Based Network Distance 89\u003c\/p\u003e \u003cp\u003e5.4 Complexity of Network Motif Detection 94\u003c\/p\u003e \u003cp\u003e5.5 Methods and Tools for Network Motif Analysis 96\u003c\/p\u003e \u003cp\u003e5.6 Analyses and Applications of Network Motifs 97\u003c\/p\u003e \u003cp\u003e5.7 Summary 106\u003c\/p\u003e \u003cp\u003e5.8 Exercises 108\u003c\/p\u003e \u003cp\u003e\u003cb\u003e6 Network Clustering 113\u003c\/b\u003e\u003cbr\u003e \u003ci\u003eBalabhaskar Balasundaram and Sergiy Butenko\u003c\/i\u003e\u003c\/p\u003e \u003cp\u003e6.1 Introduction 113\u003c\/p\u003e \u003cp\u003e6.2 Notations and Definitions 115\u003c\/p\u003e \u003cp\u003e6.3 Network Clustering Problem 118\u003c\/p\u003e \u003cp\u003e6.4 Clique-Based Clustering 119\u003c\/p\u003e \u003cp\u003e6.5 Center-Based Clustering 125\u003c\/p\u003e \u003cp\u003e6.6 Conclusion 131\u003c\/p\u003e \u003cp\u003e6.7 Summary 133\u003c\/p\u003e \u003cp\u003e6.8 Exercises 133\u003c\/p\u003e \u003cp\u003e\u003cb\u003e7 Petri Nets 139\u003c\/b\u003e\u003cbr\u003e \u003ci\u003eIna Koch and Monika Heiner\u003c\/i\u003e\u003c\/p\u003e \u003cp\u003e7.1 Introduction 139\u003c\/p\u003e \u003cp\u003e7.2 Qualitative Modeling 141\u003c\/p\u003e \u003cp\u003e7.3 Qualitative Analysis 152\u003c\/p\u003e \u003cp\u003e7.4 Quantitative Modeling and Analysis 169\u003c\/p\u003e \u003cp\u003e7.5 Tool Support 171\u003c\/p\u003e \u003cp\u003e7.6 Case Studies 172\u003c\/p\u003e \u003cp\u003e7.7 Summary 174\u003c\/p\u003e \u003cp\u003e7.8 Exercises 175\u003c\/p\u003e \u003cp\u003e\u003cb\u003ePART III BIOLOGICAL NETWORKS 181\u003c\/b\u003e\u003c\/p\u003e \u003cp\u003e\u003cb\u003e8 Signal Transduction and Gene Regulation Networks 183\u003c\/b\u003e\u003cbr\u003e \u003ci\u003eAnatolij P. Potapov\u003c\/i\u003e\u003c\/p\u003e \u003cp\u003e8.1 Introduction 183\u003c\/p\u003e \u003cp\u003e8.2 Decisive Role of Regulatory Networks in the Evolution and Existence of Organisms 184\u003c\/p\u003e \u003cp\u003e8.3 Gene Regulatory Network as a System of Many Subnetworks 186\u003c\/p\u003e \u003cp\u003e8.4 Databases on Gene Regulation and Software Tools for Network Analysis 187\u003c\/p\u003e \u003cp\u003e8.5 Peculiarities of Signal Transduction Networks 188\u003c\/p\u003e \u003cp\u003e8.6 Topology of Signal Transduction Networks 190\u003c\/p\u003e \u003cp\u003e8.7 Topology of Transcription Networks 191\u003c\/p\u003e \u003cp\u003e8.8 Intercellular Molecular Regulatory Networks 198\u003c\/p\u003e \u003cp\u003e8.9 Summary 200\u003c\/p\u003e \u003cp\u003e8.10 Exercises 201\u003c\/p\u003e \u003cp\u003e\u003cb\u003e9 Protein Interaction Networks 207\u003c\/b\u003e\u003cbr\u003e \u003ci\u003eFrederik Bornke\u003c\/i\u003e\u003c\/p\u003e \u003cp\u003e9.1 Introduction 207\u003c\/p\u003e \u003cp\u003e9.2 Detecting Protein Interactions 209\u003c\/p\u003e \u003cp\u003e9.3 Establishing Protein Interaction Networks 220\u003c\/p\u003e \u003cp\u003e9.4 Analyzing Protein Interaction Networks 223\u003c\/p\u003e \u003cp\u003e9.5 Summary 225\u003c\/p\u003e \u003cp\u003e9.6 Exercises 226\u003c\/p\u003e \u003cp\u003e\u003cb\u003e10 Metabolic Networks 233\u003c\/b\u003e\u003cbr\u003e \u003ci\u003eMarcio Rosa da Silva, Jibin Sun, Hongwu Ma, Feng He, and An-Ping Zeng\u003c\/i\u003e\u003c\/p\u003e \u003cp\u003e10.1 Introduction 233\u003c\/p\u003e \u003cp\u003e10.2 Visualization and Graph Representation 234\u003c\/p\u003e \u003cp\u003e10.3 Reconstruction of Genome-Scale Metabolic Networks 234\u003c\/p\u003e \u003cp\u003e10.4 Connectivity and Centrality in Metabolic Networks 239\u003c\/p\u003e \u003cp\u003e10.5 Modularity and Decomposition of Metabolic Networks 242\u003c\/p\u003e \u003cp\u003e10.6 Elementary Flux Modes and Extreme Pathways 246\u003c\/p\u003e \u003cp\u003e10.7 Summary 249\u003c\/p\u003e \u003cp\u003e10.8 Exercises 249\u003c\/p\u003e \u003cp\u003e\u003cb\u003e11 Phylogenetic Networks 255\u003c\/b\u003e\u003cbr\u003e \u003ci\u003eBirgit Gemeinholzer\u003c\/i\u003e\u003c\/p\u003e \u003cp\u003e11.1 Introduction 255\u003c\/p\u003e \u003cp\u003e11.2 Character Selection, Character Coding, and Matrices for Phylogenetic Reconstruction 257\u003c\/p\u003e \u003cp\u003e11.3 Tree Reconstruction Methodologies 260\u003c\/p\u003e \u003cp\u003e11.4 Phylogenetic Networks 264\u003c\/p\u003e \u003cp\u003e11.5 Summary 276\u003c\/p\u003e \u003cp\u003e11.6 Exercises 276\u003c\/p\u003e \u003cp\u003e\u003cb\u003e12 Ecological Networks 283\u003c\/b\u003e\u003cbr\u003e \u003ci\u003eUrsula Gaedke\u003c\/i\u003e\u003c\/p\u003e \u003cp\u003e12.1 Introduction 283\u003c\/p\u003e \u003cp\u003e12.2 Binary Food Webs 289\u003c\/p\u003e \u003cp\u003e12.3 Quantitative Trophic Food Webs 293\u003c\/p\u003e \u003cp\u003e12.4 Ecological Information Networks 298\u003c\/p\u003e \u003cp\u003e12.5 Summary 300\u003c\/p\u003e \u003cp\u003e12.6 Exercises 301\u003c\/p\u003e \u003cp\u003e\u003cb\u003e13 Correlation Networks 305\u003c\/b\u003e\u003cbr\u003e \u003ci\u003eDirk Steinhauser, Leonard Krall, Carsten Mussig, Dirk Bussis, and Bjorn Usadel\u003c\/i\u003e\u003c\/p\u003e \u003cp\u003e13.1 Introduction 305\u003c\/p\u003e \u003cp\u003e13.2 General Remarks 306\u003c\/p\u003e \u003cp\u003e13.3 Basic Notation 307\u003c\/p\u003e \u003cp\u003e13.4 Construction and Analyses of Correlation Networks 314\u003c\/p\u003e \u003cp\u003e13.5 Biological Use of Correlation Networks 321\u003c\/p\u003e \u003cp\u003e13.6 Summary 328\u003c\/p\u003e \u003cp\u003e13.7 Exercises 329\u003c\/p\u003e \u003cp\u003eReferences 330\u003c\/p\u003e \u003cp\u003e\u003cb\u003eIndex 335\u003c\/b\u003e\u003c\/p\u003e\u003c\/font\u003e\u003c\/p\u003e\r\n\r\n\u003cp\u003e\u003cfont size=\"3\"\u003eSubject Areas: Electronics \u0026amp; communications engineering [\u003ca title=\"See our other books on Electronics \u0026amp; communications engineering\" href=\"https:\/\/freshlyprintedbooks.co.uk\/search?q=%22Electronics%20\u0026amp;%20communications%20engineering%20%5BTJ%5D%22\"\u003eTJ\u003c\/a\u003e]\u003c\/font\u003e\u003c\/p\u003e\r\n\r\n\r\n\u003c\/font\u003e","brand":"Wiley-Interscience","offers":[{"title":"Brand New","offer_id":52256536920344,"sku":"9780470041444","price":98.59,"currency_code":"GBP","in_stock":true}],"thumbnail_url":"\/\/cdn.shopify.com\/s\/files\/1\/0730\/2037\/5320\/files\/9780470041444.jpg?v=1781274841","url":"https:\/\/freshlyprintedbooks.co.uk\/products\/analysis-of-biological-networks-hardback-9780470041444","provider":"Freshly Printed Books","version":"1.0","type":"link"}